📥
ChEMBL Data Deposition Guide
  • Introduction
  • Overview
    • Source Identifier
    • Depositor-Defined Identifiers
      • AIDX
      • RIDX
      • CIDX
    • File types and names
  • File structure
    • File hierarchy
    • Simplified input data schema
    • Deposition file list
    • Field names and data types - basic submission
      • The CONTACT field
      • ACTION_TYPE valid names
      • TARGET_TYPE list
      • Adding context using the ACTIVITY_PROPERTIES file
    • The ASSAY_DESCRIPTION field
  • Complex results sets
    • Linking files through depositor defined IDs
    • Linking multiple result types using TEOID
    • Supplementary data in the ACTIVITY_SUPP file
    • Flexible SAMID mapping
    • Field names and data types - more complex data types
  • Example dataset
  • Common data issues
  • Advanced features and documentation
  • Depositing activities against other depositors entities
  • Creating a COMPOUND_CTAB file from a file containing SMILES strings
  • FAQs
  • Glossary
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  1. File structure
  2. Field names and data types - basic submission

TARGET_TYPE list

ADMET

CELL-LINE

CHIMERIC PROTEIN

LIPID

MACROMOLECULE

METAL

NO TARGET

NON-MOLECULAR

NUCLEIC-ACID

OLIGOSACCHARIDE

ORGANISM

PHENOTYPE

PROTEIN

PROTEIN COMPLEX

PROTEIN COMPLEX GROUP

PROTEIN FAMILY

PROTEIN NUCLEIC-ACID COMPLEX

PROTEIN-PROTEIN INTERACTION

SELECTIVITY GROUP

SINGLE PROTEIN

SMALL MOLECULE

SUBCELLULAR

TISSUE

UNCHECKED

UNKNOWN

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Last updated 1 year ago