Depositor-Defined Identifiers

Identifiers for key entities such as compounds and assays are defined within the deposition files by using Depositor-Defined Identifiers (DDIs). These identifiers are created and maintained by depositors themselves, and provide a way for depositors to:

  • Give a meaningful unique identifier to each compound and assay in their datasets.

  • Update sets later with additional data.

In a basic data submission DDIs are used for compounds/substances, assays and references, and are called CIDX, AIDX and RIDX, respectively.

DDIs are also used for internal reference between records in a dataset, when more complex data is being submitted. ACT_ID, TEOID, REGID and SAMID are used to group together supplementary data. More information on the links between tables can be found in the Deposition Files section.

Types of Depositor-Defined ID

*IDX

Description

Primary File

AIDX

Assay ID

ASSAY

CIDX

Compound ID

COMPOUND_RECORD

RIDX

Reference ID

REFERENCE

ACT_ID

ACTivity ID

ACTIVITY

TEOID

TEst Occasion ID

ACTIVITY

REGID

REcord Grouping ID

ACTIVITY_SUPP

SAMID

Supplementary Activity Mapping ID

ACTIVITY_SUPP

  • Depositors may use a string of between 1 and 200 visible UniCode characters to define these identifiers. All deposited files should bu UTF-8 encoded.

  • DDIs are owned by the depositor; a given identifier is defined by the depositor when a deposition is first made.

  • Subsequent use of the same identifier in future ChEMBL loads will result in the updating or overwriting of the data that was associated with this identifier when it was first loaded

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