COMPOUND_RECORD.tsv

COMPOUND_RECORD files provide links between a record ID and a compound ID. If a CIDX-RIDX combination does not yet exist in the COMPOUND_RECORDS table for this src_id, then one will be created. If one already exists, then this existing one will be updated with the COMPOUND_NAME, etc, present in the incoming file. The CIDX is then referenced in ACTIVITY files, to identify which compounds were used.

You must provide at least one of COMPOUND_NAME, COMPOUND_KEY or COMPOUND_SOURCE in order to make the compound searchable. RIDX is optional, but if it is excluded the data will be assigned to the default DOC_ID for the Source.

Header

Description

Existence

Data Type

CIDX

The CIDX set by the depositor - a primary key

Mandatory

Any character up to a length of 200.

Should be a meaningful unique identifier for each Compound, not just a number.

RIDX

The RIDX cited by the depositor. MUST be owned by the same depositor

Optional

Any character up to a length of 200

COMPOUND_KEY

The local synonym used for this compound in the RIDX referenced

Mandatory

Any character up to a length of 250

COMPOUND_NAME

The name used for this compound in the RIDX referenced

Mandatory

Any character up to a length of 4000

COMPOUND_SOURCE

The source of this compound in the RIDX referenced

Optional

Any character up to a length of 400

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