📥
ChEMBL Data Deposition Guide
CtrlK
  • Introduction
  • Overview
    • Source Identifier
    • Depositor-Defined Identifiers
      • RIDX
      • AIDX
      • CIDX
  • File Types, Naming, and Deposition
  • File structure
    • File hierarchy
    • Simplified input data schema
    • Deposition file list
    • Field names and data types - minimal data submission
      • REFERENCE.tsv
      • COMPOUND_RECORD.tsv
      • COMPOUND_CTAB.sdf
        • Creating a COMPOUND_CTAB file from a file containing SMILES strings
      • ASSAY.tsv
      • ACTIVITY.tsv
      • Controlled vocabularies
        • TARGET_TYPE list
        • ACTION_TYPE valid names
    • Supplementary data files
      • Additional assay information in the ASSAY_PARAM file
      • Adding context using the ACTIVITY_PROPERTIES file
      • INFO.txt
  • Complex results sets
    • Linking files through depositor defined IDs
    • Linking multiple result types using TEOID
    • Supplementary data in the ACTIVITY_SUPP file
    • Flexible SAMID mapping
    • Field names and data types - complex data submission
  • Example dataset
  • Common data issues
  • Advanced features and documentation
  • FAQs
  • Glossary
Powered by GitBook
On this page
  1. File structure
  2. Field names and data types - minimal data submission
  3. Controlled vocabularies

TARGET_TYPE list

Specifies the type of target the experiment is assessing in the ASSAYS file.

ADMET

CELL-LINE

CHIMERIC PROTEIN

LIPID

MACROMOLECULE

METAL

NO TARGET

NON-MOLECULAR

NUCLEIC-ACID

OLIGOSACCHARIDE

ORGANISM

PHENOTYPE

PROTEIN

PROTEIN COMPLEX

PROTEIN COMPLEX GROUP

PROTEIN FAMILY

PROTEIN NUCLEIC-ACID COMPLEX

PROTEIN-PROTEIN INTERACTION

SELECTIVITY GROUP

SINGLE PROTEIN

SMALL MOLECULE

SUBCELLULAR

TISSUE

UNCHECKED

UNKNOWN

PreviousControlled vocabulariesNextACTION_TYPE valid names

Last updated 2 days ago