📥
ChEMBL Data Deposition Guide
  • Introduction
  • Overview
    • Source Identifier
    • Depositor-Defined Identifiers
      • AIDX
      • RIDX
      • CIDX
    • File types and names
  • File structure
    • File hierarchy
    • Simplified input data schema
    • Deposition file list
    • Field names and data types - basic submission
      • The CONTACT field
      • ACTION_TYPE valid names
      • TARGET_TYPE list
      • Adding context using the ACTIVITY_PROPERTIES file
    • The ASSAY_DESCRIPTION field
  • Complex results sets
    • Linking files through depositor defined IDs
    • Linking multiple result types using TEOID
    • Supplementary data in the ACTIVITY_SUPP file
    • Flexible SAMID mapping
    • Field names and data types - more complex data types
  • Example dataset
  • Common data issues
  • Advanced features and documentation
  • Depositing activities against other depositors entities
  • Creating a COMPOUND_CTAB file from a file containing SMILES strings
  • FAQs
  • Glossary
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  • Identifiers present in the files link data at different levels
  • An example of organism-based in vivo data
  • An example of plate-based in vitro data
  1. Complex results sets

Linking files through depositor defined IDs

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Last updated 2 years ago

While more basic data can be described using compound, assay and reference IDs (CIDX, AIDX and RIDX), additional identifiers are required to link more complex data, shown in the table below:

*IDX

Description

Primary File

ACT_ID

ACTivity ID

ACTIVITY

TEOID

TEst Occasion ID

ACTIVITY

REGID

REcord Grouping ID

ACTIVITY_SUPP

SAMID

Supplementary Activity Mapping ID

ACTIVITY_SUPP

Identifiers present in the files link data at different levels

An example of organism-based in vivo data

An example of plate-based in vitro data